Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024253.1 Corchorus olitorius cultivar O-4 contig24286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12343

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5963--6003
21
1.9
22
90
5
66
24
31
9
34
1.88
8227--8306
5
16.6
5
72
21
55
70
12
1
16
1.24
8222--8295
19
4.1
17
85
14
103
72
10
1
14
1.17
8214--8307
24
4.2
24
76
19
87
72
10
1
15
1.17
8221--8294
37
2.0
37
92
5
123
71
10
1
16
1.20
8887--9035
50
3.0
50
85
0
190
34
18
12
34
1.88
9649--9929
50
5.6
50
93
2
449
30
27
12
29
1.93
9943--10096
50
3.1
50
96
0
290
33
11
27
27
1.92
10397--10468
27
2.6
28
91
4
119
16
12
23
47
1.81

Tables:   1

The End!