Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024258.1 Corchorus olitorius cultivar O-4 contig24291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8262

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1211--1327
50
2.3
50
94
0
198
24
27
11
36
1.89
1247--1400
23
6.3
23
71
16
123
22
29
10
38
1.87
1247--1400
73
2.1
73
98
0
299
22
29
10
38
1.87
1320--1453
50
2.7
50
97
0
250
23
29
10
37
1.88
1211--1450
123
2.0
123
94
0
426
24
28
10
36
1.89
1540--1772
64
3.6
64
87
1
304
27
24
13
33
1.93
1739--1925
67
2.8
67
93
0
320
29
21
11
37
1.89
3526--3565
7
5.9
7
94
5
73
0
15
0
85
0.61
3526--3565
13
3.0
13
92
7
71
0
15
0
85
0.61
3526--3583
20
2.7
21
86
7
73
3
17
0
79
0.87
6483--6520
19
1.9
19
89
5
58
52
10
26
10
1.68

Tables:   1

The End!