Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024272.1 Corchorus olitorius cultivar O-4 contig24305, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17221

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
551--610
31
1.9
31
93
0
102
20
21
18
40
1.92
685--751
31
2.2
31
89
5
100
37
14
17
29
1.91
3979--4105
60
2.1
60
95
0
227
21
29
12
36
1.90
5395--6238
168
5.0
168
88
4
1139
25
10
31
32
1.89
5395--6238
339
2.5
336
87
5
1171
25
10
31
32
1.89
10629--10653
9
2.8
9
100
0
50
60
32
0
8
1.26
13549--13588
5
7.6
5
83
10
53
0
25
2
72
0.97
13549--13590
22
2.0
20
90
9
66
0
26
2
71
0.98
14838--14910
29
2.5
29
88
2
110
17
24
19
38
1.93
16657--16700
22
2.0
22
100
0
88
27
27
31
13
1.94

Tables:   1

The End!