Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024274.1 Corchorus olitorius cultivar O-4 contig24307, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37839

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13644--13669
13
2.0
13
100
0
52
15
0
30
53
1.42
14021--14072
19
2.8
19
72
13
54
50
0
1
48
1.12
24623--24672
21
2.4
21
79
0
55
34
28
20
18
1.95
28996--29073
28
2.8
29
75
13
72
37
8
16
37
1.80
29889--29947
6
9.7
6
83
8
75
0
18
0
81
0.69
29889--29947
19
3.2
19
84
13
79
0
18
0
81
0.69
31585--31617
16
2.1
16
94
0
57
45
39
9
6
1.61
33385--33447
31
2.0
31
90
6
101
44
6
17
31
1.74
33823--33931
53
2.1
53
96
0
200
41
11
11
35
1.77
35747--35962
110
2.0
107
90
2
342
39
11
6
43
1.65
36981--37042
32
1.9
32
86
0
88
53
8
8
30
1.59

Tables:   1

The End!