Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024281.1 Corchorus olitorius cultivar O-4 contig24314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22692

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3313--3357
21
2.1
21
87
0
63
31
31
22
15
1.95
4656--4707
26
2.0
26
84
0
68
21
11
5
61
1.50
4956--5012
10
6.4
9
72
25
50
10
12
3
73
1.21
13542--13593
26
2.0
26
84
0
68
21
11
5
61
1.50
16720--16794
3
25.0
3
100
0
150
66
0
0
33
0.92
19727--19768
15
2.7
15
92
3
66
11
9
14
64
1.50
20081--20155
33
2.1
33
88
11
105
34
5
13
46
1.66
20138--20206
26
2.6
26
72
2
75
55
5
8
30
1.54
20163--20243
34
2.4
34
84
8
96
44
7
8
39
1.63

Tables:   1

The End!