Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024283.1 Corchorus olitorius cultivar O-4 contig24316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23430

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1368--1484
21
5.6
21
92
2
182
27
27
15
29
1.96
2146--2175
6
4.8
6
95
4
51
3
13
0
83
0.77
4659--4784
49
2.6
48
82
7
150
29
15
5
50
1.66
11062--11148
44
2.0
44
100
0
174
37
20
11
29
1.88
14046--14135
16
5.7
15
75
12
74
28
38
22
10
1.86
17655--17696
21
2.0
21
90
0
66
28
23
16
30
1.96
17812--17882
21
3.4
21
96
0
124
28
23
19
28
1.99
19680--19817
33
4.2
33
80
3
127
44
19
7
28
1.79
23155--23288
21
6.4
21
92
1
191
29
16
26
27
1.97

Tables:   1

The End!