Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024300.1 Corchorus olitorius cultivar O-4 contig24333, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14974

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
796--859
32
1.9
33
84
6
85
70
1
14
14
1.25
2353--3162
430
1.9
433
85
3
1146
31
15
12
41
1.84
5718--5752
10
3.5
10
88
11
54
8
31
0
60
1.27
5716--5752
19
1.9
20
94
5
67
8
29
0
62
1.24
6782--6849
16
4.2
16
76
0
73
8
10
27
52
1.65
7993--8038
11
4.1
11
80
5
56
2
23
50
23
1.61
7993--8037
23
2.0
23
90
0
72
2
24
51
22
1.60
8043--8086
16
2.8
16
82
0
52
9
11
38
40
1.73
8370--8549
93
1.9
93
92
2
299
33
15
2
49
1.56
13865--14014
74
2.0
74
97
0
282
35
17
16
31
1.92
14265--14472
105
2.0
101
87
5
292
35
10
2
51
1.50
14587--14633
17
2.8
17
75
12
51
36
2
0
61
1.08

Tables:   1

The End!