Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024302.1 Corchorus olitorius cultivar O-4 contig24335, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26769

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
507--547
20
2.0
20
95
0
73
39
0
2
58
1.11
5711--5736
13
2.0
13
100
0
52
61
0
7
30
1.24
10587--10668
40
2.0
40
81
9
96
47
15
12
24
1.80
12891--12984
26
3.6
26
89
0
134
35
14
14
35
1.88
15592--15645
21
2.6
21
84
0
72
22
44
18
14
1.86
16296--16326
15
2.1
15
100
0
62
41
19
12
25
1.87
20876--20903
10
2.8
10
100
0
56
32
17
0
50
1.47
24103--24138
19
1.9
18
88
5
54
27
22
8
41
1.82

Tables:   1

The End!