Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024312.1 Corchorus olitorius cultivar O-4 contig24345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6465

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
737--864
66
1.9
66
82
3
159
42
10
10
36
1.74
719--876
22
7.2
22
71
7
99
44
9
11
34
1.73
832--883
22
2.4
22
83
3
70
44
7
11
36
1.70
960--1148
22
8.6
22
69
10
102
40
8
15
35
1.77
1185--1240
23
2.5
23
80
13
71
39
7
19
33
1.79
1185--1548
22
16.5
22
65
14
97
39
10
15
34
1.81
1509--1556
22
2.2
22
85
7
62
47
8
16
27
1.75
1526--1628
40
2.6
40
90
0
161
45
7
13
33
1.72
1757--1786
13
2.3
13
100
0
60
40
20
0
40
1.52
6184--6226
22
1.9
23
95
4
79
37
13
23
25
1.92

Tables:   1

The End!