Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024316.1 Corchorus olitorius cultivar O-4 contig24349, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12042

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59--148
22
4.1
22
82
0
117
56
5
23
14
1.59
1380--1412
6
5.7
6
89
3
50
3
12
0
84
0.72
9091--9138
24
2.0
25
87
4
71
16
6
4
72
1.20
9572--9597
13
2.0
13
100
0
52
30
7
15
46
1.74
10349--10385
6
5.8
6
90
9
56
48
0
0
51
1.00
10346--10385
19
2.0
20
95
4
73
50
0
0
50
1.00
10349--10385
13
2.9
13
92
4
58
48
0
0
51
1.00
10349--10396
19
2.6
18
83
12
53
45
2
0
52
1.12
11489--11516
12
2.3
12
100
0
56
0
17
32
50
1.47

Tables:   1

The End!