Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024317.1 Corchorus olitorius cultivar O-4 contig24350, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23701

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5361--5399
18
2.2
18
90
0
60
69
0
30
0
0.89
7730--7801
28
2.6
28
85
10
96
54
6
12
26
1.63
9360--9387
3
9.3
3
100
0
56
32
32
35
0
1.58
16790--17007
107
2.1
105
81
6
244
47
3
11
37
1.57
16960--17220
104
2.5
102
79
10
244
48
5
11
34
1.63
17459--17505
18
2.6
17
83
12
58
80
4
12
2
0.94
19241--19279
20
1.9
21
89
5
62
15
12
17
53
1.72
22704--22758
2
27.0
2
81
3
65
45
7
0
47
1.30
23038--23124
18
4.7
18
69
23
63
41
2
3
52
1.31
23032--23118
27
3.1
27
85
9
129
42
3
3
50
1.36
23082--23122
15
2.7
16
81
7
50
46
2
0
51
1.14
23032--23121
30
3.1
29
84
7
121
42
3
3
51
1.35

Tables:   1

The End!