Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024321.1 Corchorus olitorius cultivar O-4 contig24354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9843

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--390
201
1.9
199
89
1
591
34
13
18
33
1.90
1502--1561
20
3.1
20
67
26
56
30
18
0
51
1.46
1492--1569
38
2.1
38
92
4
131
30
17
1
50
1.55
3763--3897
49
2.8
47
86
8
184
27
17
5
50
1.67
4766--4821
29
1.9
29
92
0
94
35
25
7
32
1.83
6739--7336
299
2.0
299
92
1
984
25
14
16
43
1.86
8900--8926
6
4.5
6
100
0
54
66
0
14
18
1.25

Tables:   1

The End!