Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024323.1 Corchorus olitorius cultivar O-4 contig24356, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9328

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4485--4533
2
24.5
2
100
0
98
0
48
0
51
1.00
5896--5973
27
2.9
26
82
3
84
14
20
28
37
1.91
6064--6110
20
2.4
20
89
3
69
27
17
6
48
1.71
9170--9300
36
3.6
35
82
14
158
41
16
12
28
1.86
9195--9309
38
3.0
37
81
16
146
42
15
13
27
1.85
9170--9309
74
1.9
74
86
8
203
42
16
12
28
1.85

Tables:   1

The End!