Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024329.1 Corchorus olitorius cultivar O-4 contig24362, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11264

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
593--1139
35
15.6
35
71
7
358
42
25
17
14
1.87
597--1096
105
4.8
105
90
1
741
41
26
16
14
1.87
593--1201
210
2.9
208
83
4
701
42
25
16
15
1.88
1225--1309
35
2.5
35
84
9
113
29
23
24
22
1.99
1225--1309
34
2.5
34
84
9
111
29
23
24
22
1.99
3574--3610
2
18.5
2
94
0
65
51
2
0
45
1.15
7955--7980
12
2.2
12
100
0
52
30
38
7
23
1.83
8311--8353
22
2.0
22
85
0
59
23
23
30
23
1.99
8311--8502
69
2.7
70
83
7
230
19
21
26
33
1.97
11113--11143
15
2.1
15
93
0
53
19
12
19
48
1.81

Tables:   1

The End!