Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024339.1 Corchorus olitorius cultivar O-4 contig24372, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8650

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
961--996
17
2.1
17
89
0
54
38
19
11
30
1.86
2678--2713
13
2.7
13
91
4
54
41
19
5
33
1.75
3078--3520
226
2.0
227
91
2
721
33
20
11
34
1.88
4259--4306
19
2.6
20
75
21
59
58
16
8
16
1.61
5429--5551
40
3.0
41
84
6
153
34
10
13
41
1.79

Tables:   1

The End!