Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024342.1 Corchorus olitorius cultivar O-4 contig24375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13827

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3874--3979
30
3.5
30
93
0
176
23
33
16
26
1.95
5824--5853
2
15.0
2
100
0
60
50
0
0
50
1.00
11121--11294
73
2.4
74
83
6
203
40
16
14
27
1.88
11157--11288
35
3.7
34
81
13
151
39
17
15
28
1.90
11190--11302
38
3.0
37
82
14
151
41
15
14
28
1.86
11165--11302
73
1.9
74
88
7
210
40
16
14
28
1.88
12140--12178
19
2.1
19
100
0
78
35
15
5
43
1.69

Tables:   1

The End!