Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024343.1 Corchorus olitorius cultivar O-4 contig24376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3829

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
327--359
7
4.9
7
85
7
50
27
15
0
57
1.38
330--354
13
1.9
13
100
0
50
24
20
0
56
1.43
356--416
8
7.6
8
85
7
79
0
1
13
85
0.68
356--419
18
3.6
18
81
12
78
0
1
14
84
0.70
362--415
25
2.2
25
93
0
90
0
0
14
85
0.61
362--419
17
3.3
17
90
4
80
0
0
15
84
0.62
2153--2182
12
2.4
13
94
5
53
43
10
23
23
1.83

Tables:   1

The End!