Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024344.1 Corchorus olitorius cultivar O-4 contig24377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18087

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--75
22
2.0
24
88
8
71
57
12
17
12
1.65
1873--1940
22
3.1
21
71
24
61
39
2
1
55
1.24
2316--2370
27
2.0
27
86
6
76
43
18
0
38
1.50
2624--2684
30
2.0
30
100
0
122
26
22
3
47
1.67
3871--4309
30
14.7
30
91
1
589
30
21
19
28
1.98
17042--17066
12
2.1
12
100
0
50
36
8
48
8
1.62

Tables:   1

The End!