Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024345.1 Corchorus olitorius cultivar O-4 contig24378, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22562

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4758--4801
20
2.2
20
95
0
79
25
2
40
31
1.68
5957--6042
27
3.1
27
79
9
93
40
23
16
19
1.91
5965--6044
28
2.9
28
84
1
108
40
23
17
18
1.91
18509--18540
2
16.0
2
100
0
64
50
0
0
50
1.00
21779--21846
32
2.1
33
89
5
104
44
14
0
41
1.45

Tables:   1

The End!