Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024364.1 Corchorus olitorius cultivar O-4 contig24397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29857

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1459--1484
13
2.0
13
100
0
52
15
0
30
53
1.42
4929--4961
2
17.0
2
93
6
59
51
0
0
48
1.00
5690--5728
19
2.1
19
90
0
60
35
2
2
58
1.25
6406--6456
24
2.1
25
85
3
68
70
5
5
17
1.28
8664--8728
30
2.2
31
83
13
91
35
16
4
43
1.69
12140--12185
24
2.0
23
82
4
56
45
10
21
21
1.82
16140--16188
24
2.0
24
96
0
89
20
24
8
46
1.77
18676--18923
76
3.3
76
93
2
426
44
18
11
25
1.84
20321--20365
21
2.1
21
95
0
81
42
6
13
37
1.70

Tables:   1

The End!