Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024367.1 Corchorus olitorius cultivar O-4 contig24400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22247

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
802--868
21
3.1
21
73
2
62
14
19
46
19
1.84
14313--14378
27
2.4
27
97
0
123
48
16
4
30
1.66
14714--14756
19
2.3
19
88
8
61
76
0
0
23
0.78
14758--14790
16
2.0
17
88
5
50
63
3
0
33
1.10
15692--15770
27
3.0
26
81
9
88
13
15
25
45
1.83
20158--20212
28
2.0
28
82
7
67
30
34
12
21
1.91
21746--21922
73
2.4
72
82
12
202
40
17
14
28
1.88
21747--21922
38
4.9
35
78
18
166
40
17
14
27
1.88
21791--21926
73
1.9
73
89
6
213
40
16
13
28
1.88
21940--21979
21
1.9
20
85
10
53
15
0
7
77
0.98

Tables:   1

The End!