Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024377.1 Corchorus olitorius cultivar O-4 contig24410, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36247

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
230--299
36
1.9
36
88
0
104
60
8
11
20
1.57
9617--9668
23
2.4
21
80
6
59
19
9
17
53
1.70
9676--9728
23
2.3
23
81
12
63
45
0
0
54
0.99
11762--11851
44
2.1
42
85
6
119
37
21
5
35
1.77
14298--14332
12
2.9
12
86
0
52
54
2
0
42
1.15
15515--15827
162
1.9
162
84
2
423
22
22
25
29
1.99
19035--19182
76
1.9
76
94
0
260
52
14
11
21
1.74
25205--25491
142
2.0
142
93
0
493
34
16
15
33
1.90
27978--28044
21
3.1
21
78
2
71
17
46
20
14
1.84

Tables:   1

The End!