Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024379.1 Corchorus olitorius cultivar O-4 contig24412, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5867

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2799--2887
42
2.1
42
83
10
110
24
20
11
43
1.84
3491--3542
19
2.6
21
73
14
56
50
11
11
26
1.73
4038--4101
14
4.5
14
84
9
60
42
6
14
37
1.70
4052--4103
14
3.8
13
87
10
68
42
7
15
34
1.75
4392--4429
12
3.2
12
84
0
58
57
13
2
26
1.49
4777--4819
12
3.7
12
79
14
54
72
0
16
11
1.13
5731--5867
50
2.7
50
95
0
238
29
28
14
27
1.95

Tables:   1

The End!