Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024388.1 Corchorus olitorius cultivar O-4 contig24421, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29666

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1110--1162
22
2.4
23
71
9
56
54
0
20
24
1.44
14589--14840
132
1.9
130
95
1
450
40
20
15
23
1.90
26595--26674
30
2.7
30
84
7
92
30
18
10
41
1.83
26792--26888
31
3.1
31
90
1
158
42
10
15
31
1.81
27600--27694
50
1.9
50
95
0
172
32
8
0
58
1.28
27942--28000
22
2.5
24
78
15
61
23
22
5
49
1.70

Tables:   1

The End!