Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024390.1 Corchorus olitorius cultivar O-4 contig24423, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19129

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2964--2995
15
2.1
15
100
0
64
15
6
28
50
1.68
3938--3984
26
1.9
24
87
12
69
40
4
27
27
1.75
4601--4642
21
2.0
21
95
0
75
21
19
35
23
1.96
4529--4711
71
2.6
71
90
2
278
20
22
26
30
1.98
7750--7779
13
2.2
14
94
5
53
0
43
0
56
0.99
8726--8773
25
2.0
24
92
8
80
66
10
16
6
1.41
13144--13402
51
5.1
51
88
3
371
38
14
15
31
1.87
13144--13402
103
2.5
103
86
4
382
38
14
15
31
1.87
13359--13439
35
2.2
36
89
4
119
39
13
14
32
1.85

Tables:   1

The End!