Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024393.1 Corchorus olitorius cultivar O-4 contig24426, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9401

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1941--2005
27
2.4
27
89
0
103
36
27
18
16
1.93
3679--3714
19
1.9
18
88
5
54
33
22
2
41
1.68
4519--4660
71
2.0
71
84
5
189
36
16
11
35
1.85
6613--6674
30
2.0
30
84
9
81
62
9
9
17
1.52
8555--8621
34
2.0
34
90
0
107
23
28
19
28
1.98
8928--8969
15
2.7
15
88
3
66
64
14
9
11
1.50

Tables:   1

The End!