Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024394.1 Corchorus olitorius cultivar O-4 contig24427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10395

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
749--819
21
3.4
20
81
9
79
43
15
15
25
1.86
975--1044
27
2.6
27
81
4
88
42
17
17
22
1.88
1741--2005
69
3.8
69
89
0
377
29
15
28
26
1.96
2092--2270
92
2.0
91
88
2
270
36
13
20
29
1.91
2697--2819
48
2.5
50
85
2
160
32
13
18
35
1.89
3413--3440
6
4.7
6
100
0
56
14
0
14
71
1.15
3450--3495
12
3.8
12
85
5
65
2
0
15
82
0.76
3450--3483
15
2.4
14
90
9
59
0
0
14
85
0.60
3450--3500
14
3.6
14
82
12
52
3
0
15
80
0.86
3774--3798
13
1.9
13
100
0
50
40
8
12
40
1.72
7988--8149
78
2.1
78
94
0
279
27
27
11
33
1.91
8034--8098
28
2.4
28
97
2
123
30
29
10
29
1.91
8065--8599
51
10.5
51
94
2
814
26
26
11
35
1.90
8654--8989
50
6.7
50
93
1
548
27
12
29
30
1.93

Tables:   1

The End!