Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024396.1 Corchorus olitorius cultivar O-4 contig24429, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17205

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3573--3660
28
3.3
27
64
13
74
30
17
13
38
1.88
3575--3722
52
2.8
52
93
0
251
30
16
12
39
1.86
3679--3863
37
4.9
37
74
13
169
30
14
16
37
1.89
3808--3863
17
3.0
20
67
17
57
32
16
17
33
1.92
3679--3937
115
2.2
114
81
9
301
29
15
16
37
1.91
4515--4704
41
4.7
41
81
8
223
13
11
24
51
1.73
4513--4729
40
5.4
40
78
9
203
13
11
23
51
1.73
4515--4729
81
2.7
81
88
5
305
13
11
23
51
1.73
5150--5234
32
2.7
32
81
3
100
12
12
36
37
1.82
5138--5236
16
6.2
16
67
14
71
13
12
36
38
1.81
10232--10298
33
2.0
33
97
0
125
7
26
16
49
1.72
10411--10445
15
2.3
15
95
0
61
17
5
31
45
1.71
16995--17053
31
2.0
28
90
9
91
28
13
15
42
1.85

Tables:   1

The End!