Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024404.1 Corchorus olitorius cultivar O-4 contig24437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22458

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4619--4692
31
2.6
28
78
8
78
41
14
25
17
1.88
12207--12236
14
2.1
14
93
0
51
23
0
13
63
1.29
12260--12316
30
1.9
29
86
10
80
22
14
5
57
1.56
13614--13707
43
2.2
42
94
3
161
20
13
31
34
1.92
13864--14064
102
2.0
102
94
0
357
19
14
27
37
1.91
16451--16620
46
3.7
45
84
2
216
14
25
21
38
1.91
17277--17319
22
2.0
22
100
0
86
25
4
32
37
1.77
19770--19863
43
2.2
43
88
3
136
21
13
30
34
1.92
20022--20220
102
2.0
102
94
0
353
20
14
27
37
1.91

Tables:   1

The End!