Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024413.1 Corchorus olitorius cultivar O-4 contig24446, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10976

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
353--433
39
2.0
40
92
2
137
37
3
8
50
1.51
5048--5108
4
14.8
4
83
6
59
42
22
6
27
1.78
5073--5142
24
2.9
24
82
0
77
37
18
11
32
1.87
6270--6305
17
2.2
17
90
5
56
0
11
2
86
0.68
10838--10936
2
49.5
2
100
0
198
50
49
0
0
1.00
10936--10976
2
20.5
2
100
0
82
51
0
0
48
1.00

Tables:   1

The End!