Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024419.1 Corchorus olitorius cultivar O-4 contig24452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9721

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
419--460
21
2.0
21
100
0
84
52
14
4
28
1.62
2279--2411
60
2.2
60
80
9
137
36
18
14
31
1.90
2590--2776
22
8.4
22
70
16
118
41
9
16
32
1.81
2832--2951
22
5.5
22
82
2
116
36
11
13
38
1.81
2840--2970
44
3.0
44
78
6
140
35
11
16
36
1.84
3811--3865
28
2.0
28
88
0
83
20
20
18
41
1.90
3844--3883
20
2.0
21
90
5
64
17
27
17
37
1.92

Tables:   1

The End!