Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024422.1 Corchorus olitorius cultivar O-4 contig24455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12734

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--123
28
1.9
28
85
11
74
62
11
5
20
1.49
553--594
22
1.9
22
95
0
75
11
23
54
9
1.66
1570--1594
2
12.5
2
100
0
50
52
0
0
48
1.00
2586--2668
41
2.0
40
84
11
107
48
10
16
24
1.78
3512--3605
45
2.2
43
86
7
129
39
21
4
35
1.73
5068--5105
16
2.4
16
95
4
69
52
39
7
0
1.31
6180--6241
31
2.0
31
93
0
106
30
19
6
43
1.76
6277--6446
93
1.8
94
91
3
281
33
12
2
51
1.52
7096--7130
17
2.1
17
100
0
70
5
5
34
54
1.48
7939--7972
18
1.9
18
88
5
52
20
20
5
52
1.67
8682--8729
9
5.3
9
97
0
87
10
10
41
37
1.74
9102--9149
14
3.6
14
72
11
55
29
27
10
33
1.90
11106--11177
28
2.6
26
83
12
90
16
18
22
43
1.88

Tables:   1

The End!