Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024423.1 Corchorus olitorius cultivar O-4 contig24456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2063

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
788--950
54
3.0
54
88
0
245
26
17
22
32
1.97
915--1230
35
9.0
35
82
8
358
25
13
20
40
1.89
1022--1233
37
6.2
31
81
9
115
26
12
19
41
1.87
938--1230
101
2.8
105
83
11
366
25
13
20
40
1.88
921--1230
136
2.2
141
88
6
454
25
13
20
40
1.89

Tables:   1

The End!