Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024431.1 Corchorus olitorius cultivar O-4 contig24464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9951

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
205--243
2
20.5
2
84
10
55
43
0
2
53
1.14
2274--2338
31
2.1
32
88
2
96
30
20
7
41
1.80
2550--2598
23
2.2
21
82
13
55
55
2
2
40
1.23
2595--2632
18
2.2
18
90
9
62
84
2
7
5
0.86
4364--4785
164
2.6
163
90
2
650
45
23
4
27
1.72
5230--5297
29
2.2
32
80
12
81
38
25
14
22
1.92
8404--8439
2
19.0
2
88
11
58
50
0
0
50
1.00
8823--8867
18
2.5
18
92
0
72
0
26
6
66
1.16

Tables:   1

The End!