Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024437.1 Corchorus olitorius cultivar O-4 contig24470, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7085

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--695
211
3.3
211
98
1
1344
36
18
15
30
1.91
2076--2121
21
2.0
23
84
12
60
39
13
13
34
1.83
2135--2187
27
1.9
28
88
11
83
35
18
5
39
1.75
2477--2516
15
2.6
16
88
4
55
62
12
10
15
1.54
5706--5887
29
5.9
29
84
13
247
32
17
16
33
1.92
5791--5927
40
3.8
36
77
21
135
33
17
16
32
1.92
5828--5887
30
2.0
29
93
3
102
31
16
15
36
1.90
5760--5927
69
2.4
68
89
4
257
33
17
16
33
1.92
6626--6684
25
2.4
24
91
5
100
49
15
16
18
1.80

Tables:   1

The End!