Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024443.1 Corchorus olitorius cultivar O-4 contig24476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52803

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1172--1229
22
2.6
22
97
0
107
39
13
22
24
1.90
1269--1331
22
3.0
22
90
4
103
46
14
19
20
1.84
1549--1675
60
2.1
60
95
0
236
21
26
17
34
1.95
1718--1772
19
2.8
20
86
5
67
49
3
1
45
1.30
1722--1779
21
2.7
21
77
20
57
51
3
1
43
1.28
10043--10071
5
5.8
5
100
0
58
82
17
0
0
0.66
13694--13751
24
2.4
24
100
0
116
39
8
0
51
1.33
13686--13719
18
2.0
16
88
11
50
38
5
0
55
1.24
38920--38965
22
2.0
23
83
4
58
13
19
26
41
1.88
43085--43233
74
2.0
74
97
0
280
28
12
22
36
1.91
48445--48483
16
2.4
16
91
0
60
25
17
25
30
1.97
52006--52239
37
6.1
38
81
12
255
30
16
17
35
1.92
52002--52232
76
3.0
76
87
7
290
29
16
17
35
1.92

Tables:   1

The End!