Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024444.1 Corchorus olitorius cultivar O-4 contig24477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41182

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10977--11030
23
2.5
22
82
11
67
20
20
18
40
1.91
11598--11639
13
3.1
14
80
10
52
4
23
45
26
1.73
18437--18490
19
2.6
21
77
19
60
38
18
3
38
1.69
27515--27564
13
3.6
14
76
10
50
82
6
10
2
0.92
27515--27564
7
7.3
7
77
11
50
82
6
10
2
0.92
27514--27564
20
2.5
20
81
9
59
80
7
9
1
0.98
30380--30533
68
2.3
68
96
0
290
30
13
17
38
1.89
30995--31064
16
4.4
16
78
10
72
44
38
11
5
1.64
34626--34659
2
17.0
2
87
0
50
50
5
0
44
1.26
36285--36346
32
1.9
32
96
0
115
24
8
17
50
1.73
36469--36572
51
2.0
50
87
7
145
48
6
10
34
1.64
37210--37388
84
2.1
84
89
1
270
39
34
16
9
1.81
37473--37511
14
2.6
14
88
8
51
43
38
10
7
1.67

Tables:   1

The End!