Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024454.1 Corchorus olitorius cultivar O-4 contig24487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17800

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2354--2390
6
6.5
6
81
12
51
29
0
0
70
0.88
9251--9317
23
2.9
23
75
4
64
28
35
8
26
1.87
13001--13051
18
3.1
18
70
21
56
29
3
25
41
1.73
15383--15416
11
3.1
11
100
0
68
38
8
44
8
1.67
15975--17739
154
11.5
154
91
0
2757
40
19
19
21
1.92
17664--17800
73
1.9
73
95
0
247
41
15
20
22
1.89

Tables:   1

The End!