Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024455.1 Corchorus olitorius cultivar O-4 contig24488, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13570

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
959--993
11
3.2
11
87
0
52
8
14
0
77
0.99
4461--4791
43
7.8
42
88
5
488
41
27
11
20
1.86
4461--4791
84
3.9
84
94
2
583
41
27
11
20
1.86
4458--4791
127
2.6
128
88
4
491
41
27
11
20
1.86
4786--4888
52
1.9
54
84
7
138
26
22
20
31
1.98
4905--4931
2
13.5
2
100
0
54
48
0
0
51
1.00
12089--12131
16
2.7
15
89
10
68
11
6
13
67
1.41
13485--13528
15
2.8
16
79
6
54
36
40
13
9
1.76

Tables:   1

The End!