Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024468.1 Corchorus olitorius cultivar O-4 contig24501, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27774

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
676--717
22
1.9
22
85
0
57
64
9
9
16
1.49
5177--5212
19
1.9
18
88
5
54
41
8
22
27
1.82
5165--5224
30
2.0
30
83
6
77
41
8
18
31
1.80
17531--17581
25
2.0
25
100
0
102
23
17
23
35
1.95
21033--21097
2
33.0
2
81
3
78
44
3
3
49
1.33
21099--21123
2
12.5
2
100
0
50
0
0
48
52
1.00

Tables:   1

The End!