Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024469.1 Corchorus olitorius cultivar O-4 contig24502, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23002

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2970--2995
13
2.0
13
100
0
52
53
30
7
7
1.57
5806--5853
8
5.6
8
83
13
60
12
2
0
85
0.69
5812--5853
19
2.3
18
92
8
75
11
0
0
88
0.53
10463--10605
25
5.8
25
89
0
207
20
21
32
25
1.98
10458--10605
75
2.0
74
90
1
233
22
21
31
25
1.98
10955--10990
19
1.9
18
88
5
54
41
8
22
27
1.82
10943--11002
30
2.0
30
83
6
77
41
8
18
31
1.80
12251--12293
22
2.0
22
81
9
52
16
9
11
62
1.53

Tables:   1

The End!