Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024473.1 Corchorus olitorius cultivar O-4 contig24506, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32896

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1034--1079
19
2.4
19
96
0
83
21
23
6
47
1.74
4200--4233
2
17.0
2
100
0
68
50
0
0
50
1.00
4713--4857
25
5.8
25
90
0
220
19
20
33
26
1.97
4710--4857
75
2.0
74
93
1
251
20
20
32
26
1.97
5380--5425
19
2.4
19
96
0
83
21
23
6
47
1.74
10725--10807
41
2.0
41
97
0
157
37
12
13
37
1.82
10796--10909
37
3.1
37
97
0
210
34
20
9
35
1.85
15645--15727
41
2.0
41
95
0
148
38
12
12
37
1.80
20178--20203
11
2.4
11
100
0
52
30
15
7
46
1.74
20175--20203
11
2.5
12
88
11
51
34
13
6
44
1.71
22586--22632
23
2.0
23
100
0
94
17
8
34
40
1.79
30751--30775
13
1.9
13
100
0
50
32
0
20
48
1.50

Tables:   1

The End!