Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024474.1 Corchorus olitorius cultivar O-4 contig24507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7290

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
659--745
21
4.0
22
77
14
81
40
9
17
33
1.81
670--836
22
7.7
22
73
14
107
40
7
14
37
1.76
691--836
22
6.7
23
73
16
114
39
6
14
39
1.73
716--841
43
2.9
44
80
4
130
40
7
11
40
1.69
4992--5030
20
2.0
20
85
10
53
28
5
2
64
1.28
5358--5480
44
2.8
44
83
4
142
32
11
19
36
1.87
5356--5548
22
8.8
21
70
8
91
32
10
19
37
1.85
5403--5510
44
2.4
44
84
3
126
32
12
17
37
1.88
5572--6457
22
40.7
22
67
15
285
38
9
16
35
1.81
6012--6171
87
1.8
86
80
11
193
41
9
16
31
1.81
6516--6542
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!