Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024475.1 Corchorus olitorius cultivar O-4 contig24508, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13853

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
654--691
18
2.1
18
100
0
76
10
10
28
50
1.70
2610--2641
2
16.0
2
100
0
64
50
0
0
50
1.00
7792--7874
27
3.1
27
77
17
84
18
24
20
37
1.94
10478--10521
23
2.0
21
82
8
52
50
4
4
40
1.43
10919--10943
5
5.0
5
100
0
50
40
0
0
60
0.97
11686--11713
14
2.0
14
100
0
56
57
7
7
28
1.52
11974--13097
304
3.6
303
73
11
859
38
16
13
31
1.87
13825--13852
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!