Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024476.1 Corchorus olitorius cultivar O-4 contig24509, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42782

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6591--6627
2
19.0
2
94
5
67
48
0
0
51
1.00
8457--8523
35
1.9
35
84
0
89
25
0
32
41
1.56
9436--9585
44
3.4
44
80
7
148
37
8
14
40
1.75
9436--9585
22
6.9
22
72
11
96
37
8
14
40
1.75
9643--9686
2
22.0
2
100
0
88
50
0
0
50
1.00
15301--15389
44
2.0
45
93
2
153
43
11
14
30
1.80
19706--19744
2
19.5
2
100
0
78
51
0
0
48
1.00
19888--20092
108
1.9
108
95
0
374
26
21
21
29
1.99
23507--23554
21
2.3
21
96
0
87
16
29
18
35
1.93
29180--29214
12
2.9
12
95
0
61
28
17
8
45
1.77
29099--29413
109
2.9
109
100
0
630
26
21
8
43
1.80
29289--29323
12
2.9
12
95
0
61
28
17
8
45
1.77
30638--30677
16
2.6
16
88
4
55
25
2
7
65
1.32

Tables:   1

The End!