Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01024482.1 Corchorus olitorius cultivar O-4 contig24515, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 73048
ACGTcount: A:0.32, C:0.17, G:0.18, T:0.33
Found at i:970 original size:25 final size:24
Alignment explanation
Indices: 942--1000 Score: 66
Period size: 25 Copynumber: 2.4 Consensus size: 24
932 TATGCGCGAT
*
942 TATACTATATGATACTATATTA-TAC
1 TATATTATAT-ATACTA-ATTATTAC
*
967 TATATTATAATATAGTAATTATTAC
1 TATATTAT-ATATACTAATTATTAC
992 TATATTATA
1 TATATTATA
1001 AATTTCGGAC
Statistics
Matches: 30, Mismatches: 2, Indels: 5
0.81 0.05 0.14
Matches are distributed among these distances:
24 5 0.17
25 23 0.77
26 2 0.07
ACGTcount: A:0.42, C:0.07, G:0.03, T:0.47
Consensus pattern (24 bp):
TATATTATATATACTAATTATTAC
Found at i:972 original size:10 final size:10
Alignment explanation
Indices: 940--980 Score: 64
Period size: 10 Copynumber: 4.1 Consensus size: 10
930 GATATGCGCG
940 ATTATACTAT
1 ATTATACTAT
*
950 ATGATACTAT
1 ATTATACTAT
960 ATTATACTAT
1 ATTATACTAT
*
970 ATTATAATAT
1 ATTATACTAT
980 A
1 A
981 GTAATTATTA
Statistics
Matches: 28, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
10 28 1.00
ACGTcount: A:0.44, C:0.07, G:0.02, T:0.46
Consensus pattern (10 bp):
ATTATACTAT
Found at i:1975 original size:41 final size:41
Alignment explanation
Indices: 1903--2144 Score: 308
Period size: 41 Copynumber: 5.9 Consensus size: 41
1893 GTTTGATTTG
* * *
1903 ATTTGATTCAAGGG--TCGAATGACTTGATCTTGAATTAACA
1 ATTTAATTCAAGGGTCTCG-ATGACTTGATCTTGAATTGATA
* * * *
1943 ATCTAATTCAAGGGTCTTGACGACTTGGTCTTGAATTGATA
1 ATTTAATTCAAGGGTCTCGATGACTTGATCTTGAATTGATA
* * * *
1984 ATAATTCGATTCAAGAGTCTCGATGACTTGTTCTTCAATTGATA
1 AT--TT-AATTCAAGGGTCTCGATGACTTGATCTTGAATTGATA
*
2028 ATTTAATTCAAGGGTCTCGATGACTTGTTCTTGAATTGATA
1 ATTTAATTCAAGGGTCTCGATGACTTGATCTTGAATTGATA
**
2069 ATTTAATTCAAGGGTCTCGATGACTCAATCTTGAATTGATA
1 ATTTAATTCAAGGGTCTCGATGACTTGATCTTGAATTGATA
2110 ATTTAATTCAAGGGTCTCGATGACTTGATCTTGAA
1 ATTTAATTCAAGGGTCTCGATGACTTGATCTTGAA
2145 CAAACGAAAA
Statistics
Matches: 175, Mismatches: 22, Indels: 9
0.85 0.11 0.04
Matches are distributed among these distances:
40 12 0.07
41 125 0.71
42 4 0.02
43 1 0.01
44 33 0.19
ACGTcount: A:0.29, C:0.14, G:0.19, T:0.38
Consensus pattern (41 bp):
ATTTAATTCAAGGGTCTCGATGACTTGATCTTGAATTGATA
Found at i:2265 original size:16 final size:16
Alignment explanation
Indices: 2240--2274 Score: 61
Period size: 16 Copynumber: 2.2 Consensus size: 16
2230 TCTGAAAATA
*
2240 CTTCAGAGCTTTTCTG
1 CTTCAAAGCTTTTCTG
2256 CTTCAAAGCTTTTCTG
1 CTTCAAAGCTTTTCTG
2272 CTT
1 CTT
2275 TCTGAATTGT
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
16 18 1.00
ACGTcount: A:0.14, C:0.26, G:0.14, T:0.46
Consensus pattern (16 bp):
CTTCAAAGCTTTTCTG
Found at i:25698 original size:23 final size:23
Alignment explanation
Indices: 25672--25722 Score: 84
Period size: 23 Copynumber: 2.2 Consensus size: 23
25662 AATATGTTGA
*
25672 TGAAGATCAAAATAATAATTTCT
1 TGAAAATCAAAATAATAATTTCT
*
25695 TGAAAATCAAAATAATAATTTTT
1 TGAAAATCAAAATAATAATTTCT
25718 TGAAA
1 TGAAA
25723 GCGAGCTTCT
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
23 26 1.00
ACGTcount: A:0.51, C:0.06, G:0.08, T:0.35
Consensus pattern (23 bp):
TGAAAATCAAAATAATAATTTCT
Found at i:25811 original size:44 final size:44
Alignment explanation
Indices: 25761--25848 Score: 149
Period size: 44 Copynumber: 2.0 Consensus size: 44
25751 TCCTTGAATC
*
25761 TTCTTTGATAATAAACCTCCATATACGTGGATCTTCTTTCAATA
1 TTCTTTGATAATAAACCTCCACATACGTGGATCTTCTTTCAATA
* *
25805 TTCTTTGATAATAATCTTCCACATACGTGGATCTTCTTTCAATA
1 TTCTTTGATAATAAACCTCCACATACGTGGATCTTCTTTCAATA
25849 ATCCTCCTTG
Statistics
Matches: 41, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
44 41 1.00
ACGTcount: A:0.28, C:0.20, G:0.09, T:0.42
Consensus pattern (44 bp):
TTCTTTGATAATAAACCTCCACATACGTGGATCTTCTTTCAATA
Found at i:42534 original size:22 final size:22
Alignment explanation
Indices: 42509--42583 Score: 89
Period size: 22 Copynumber: 3.4 Consensus size: 22
42499 TTGAATATTT
42509 TTATGAAATTTTGATAACTACC
1 TTATGAAATTTTGATAACTACC
* * *
42531 TTATTAAATTTTGATAACAACG
1 TTATGAAATTTTGATAACTACC
* *
42553 TTATGGAATTTTGATAATTTACC
1 TTATGAAATTTTGATAA-CTACC
42576 -TATGAAAT
1 TTATGAAAT
42584 ATGAAACTTT
Statistics
Matches: 43, Mismatches: 9, Indels: 2
0.80 0.17 0.04
Matches are distributed among these distances:
22 41 0.95
23 2 0.05
ACGTcount: A:0.37, C:0.09, G:0.11, T:0.43
Consensus pattern (22 bp):
TTATGAAATTTTGATAACTACC
Found at i:42669 original size:21 final size:22
Alignment explanation
Indices: 42583--42689 Score: 119
Period size: 23 Copynumber: 4.9 Consensus size: 22
42573 ACCTATGAAA
* **
42583 TATGAAACTTTGATAACCTAAC
1 TATGAAATTTTGATAACCTTCC
*
42605 TACGAAATTTTGATAATCCTTCC
1 TATGAAATTTTGATAA-CCTTCC
*
42628 TATGAAATTTTAATAAACCTTCC
1 TATGAAATTTTGAT-AACCTTCC
*
42651 AATGAAATTTTG-TAACCTTCC
1 TATGAAATTTTGATAACCTTCC
*
42672 TATG-ATTTTTGATAACCT
1 TATGAAATTTTGATAACCT
42690 CTCTGTGAGA
Statistics
Matches: 72, Mismatches: 10, Indels: 7
0.81 0.11 0.08
Matches are distributed among these distances:
20 6 0.08
21 17 0.24
22 15 0.21
23 32 0.44
24 2 0.03
ACGTcount: A:0.35, C:0.18, G:0.08, T:0.39
Consensus pattern (22 bp):
TATGAAATTTTGATAACCTTCC
Found at i:42923 original size:2 final size:2
Alignment explanation
Indices: 42911--42952 Score: 66
Period size: 2 Copynumber: 20.5 Consensus size: 2
42901 CCTTTGATAG
*
42911 TA TA GTA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA CA TA T
1 TA TA -TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
42953 TCGAATTGAG
Statistics
Matches: 37, Mismatches: 2, Indels: 2
0.90 0.05 0.05
Matches are distributed among these distances:
2 35 0.95
3 2 0.05
ACGTcount: A:0.48, C:0.02, G:0.02, T:0.48
Consensus pattern (2 bp):
TA
Found at i:53305 original size:14 final size:15
Alignment explanation
Indices: 53278--53310 Score: 50
Period size: 14 Copynumber: 2.3 Consensus size: 15
53268 TGACTAAAAA
53278 TAATATTAATTAAAT
1 TAATATTAATTAAAT
*
53293 TAATATTCA-TAAAT
1 TAATATTAATTAAAT
53307 TAAT
1 TAAT
53311 TCTTAAAAAT
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
14 9 0.53
15 8 0.47
ACGTcount: A:0.52, C:0.03, G:0.00, T:0.45
Consensus pattern (15 bp):
TAATATTAATTAAAT
Found at i:53938 original size:17 final size:17
Alignment explanation
Indices: 53916--53948 Score: 57
Period size: 17 Copynumber: 1.9 Consensus size: 17
53906 AGTAAAATAA
*
53916 ATAAATAAATATAAATT
1 ATAAATAAATAAAAATT
53933 ATAAATAAATAAAAAT
1 ATAAATAAATAAAAAT
53949 ATTTATGAGA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
17 15 1.00
ACGTcount: A:0.70, C:0.00, G:0.00, T:0.30
Consensus pattern (17 bp):
ATAAATAAATAAAAATT
Found at i:57091 original size:12 final size:12
Alignment explanation
Indices: 57076--57125 Score: 70
Period size: 12 Copynumber: 4.4 Consensus size: 12
57066 TATAAACTAA
57076 TTTATAGGCAAT
1 TTTATAGGCAAT
*
57088 TTTAT--G-AAA
1 TTTATAGGCAAT
57097 TTTATAGGCAAT
1 TTTATAGGCAAT
57109 TTTATAGGCAAT
1 TTTATAGGCAAT
57121 TTTAT
1 TTTAT
57126 GTATCGTATT
Statistics
Matches: 33, Mismatches: 2, Indels: 6
0.80 0.05 0.15
Matches are distributed among these distances:
9 7 0.21
10 1 0.03
11 1 0.03
12 24 0.73
ACGTcount: A:0.34, C:0.06, G:0.14, T:0.46
Consensus pattern (12 bp):
TTTATAGGCAAT
Found at i:57099 original size:21 final size:21
Alignment explanation
Indices: 57074--57113 Score: 80
Period size: 21 Copynumber: 1.9 Consensus size: 21
57064 TTTATAAACT
57074 AATTTATAGGCAATTTTATGA
1 AATTTATAGGCAATTTTATGA
57095 AATTTATAGGCAATTTTAT
1 AATTTATAGGCAATTTTAT
57114 AGGCAATTTT
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 19 1.00
ACGTcount: A:0.38, C:0.05, G:0.12, T:0.45
Consensus pattern (21 bp):
AATTTATAGGCAATTTTATGA
Found at i:57691 original size:23 final size:21
Alignment explanation
Indices: 57642--57693 Score: 70
Period size: 23 Copynumber: 2.4 Consensus size: 21
57632 GAACTCATTA
57642 TATAT-TATTTAAAATATATT
1 TATATCTATTTAAAATATATT
57662 TATTATCTATTTAATAATATATAT
1 TA-TATCTATTTAA-AATATAT-T
57686 TATATCTA
1 TATATCTA
57694 ACATAGTAAA
Statistics
Matches: 28, Mismatches: 0, Indels: 5
0.85 0.00 0.15
Matches are distributed among these distances:
20 2 0.07
21 3 0.11
22 7 0.25
23 13 0.46
24 3 0.11
ACGTcount: A:0.42, C:0.04, G:0.00, T:0.54
Consensus pattern (21 bp):
TATATCTATTTAAAATATATT
Found at i:62139 original size:30 final size:30
Alignment explanation
Indices: 62105--62166 Score: 106
Period size: 30 Copynumber: 2.1 Consensus size: 30
62095 TCCCTGATTG
* *
62105 ATCCAAAAATCATAAATAAAACTCATCTCA
1 ATCCAAAAATCACAAAGAAAACTCATCTCA
62135 ATCCAAAAATCACAAAGAAAACTCATCTCA
1 ATCCAAAAATCACAAAGAAAACTCATCTCA
62165 AT
1 AT
62167 ATGAGTGTGA
Statistics
Matches: 30, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
30 30 1.00
ACGTcount: A:0.53, C:0.24, G:0.02, T:0.21
Consensus pattern (30 bp):
ATCCAAAAATCACAAAGAAAACTCATCTCA
Found at i:62945 original size:2 final size:2
Alignment explanation
Indices: 62938--62981 Score: 88
Period size: 2 Copynumber: 22.0 Consensus size: 2
62928 TTCAATAACA
62938 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
62980 AT
1 AT
62982 CATGAGAATC
Statistics
Matches: 42, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 42 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:64451 original size:13 final size:13
Alignment explanation
Indices: 64433--64484 Score: 61
Period size: 13 Copynumber: 3.9 Consensus size: 13
64423 CTGAAAACGA
64433 ACAACGGAATCAG
1 ACAACGGAATCAG
*
64446 ACAAC-GAATAGCGG
1 ACAACGGAAT--CAG
*
64460 ACAGCGGAATCAG
1 ACAACGGAATCAG
64473 ACAACGGAATCA
1 ACAACGGAATCA
64485 TAAAAACACA
Statistics
Matches: 32, Mismatches: 4, Indels: 6
0.76 0.10 0.14
Matches are distributed among these distances:
12 4 0.12
13 18 0.56
14 6 0.19
15 4 0.12
ACGTcount: A:0.44, C:0.23, G:0.25, T:0.08
Consensus pattern (13 bp):
ACAACGGAATCAG
Found at i:64752 original size:13 final size:13
Alignment explanation
Indices: 64720--64768 Score: 55
Period size: 13 Copynumber: 3.7 Consensus size: 13
64710 AAAGTAAATG
*
64720 GTCAACTATCAAAA
1 GTCAACGATC-AAA
64734 GTCAAC-AGTCAAA
1 GTCAACGA-TCAAA
*
64747 GACAACGATCAAA
1 GTCAACGATCAAA
64760 GTCAACGAT
1 GTCAACGAT
64769 GACGTGGTAG
Statistics
Matches: 31, Mismatches: 2, Indels: 5
0.82 0.05 0.13
Matches are distributed among these distances:
13 22 0.71
14 9 0.29
ACGTcount: A:0.47, C:0.22, G:0.14, T:0.16
Consensus pattern (13 bp):
GTCAACGATCAAA
Found at i:64836 original size:16 final size:17
Alignment explanation
Indices: 64794--64836 Score: 51
Period size: 13 Copynumber: 2.8 Consensus size: 17
64784 CTCTGTCAAC
64794 GGATGACATGGCAGCAT
1 GGATGACATGGCAGCAT
64811 GG-TG---TGGCAG-AT
1 GGATGACATGGCAGCAT
64823 GGATGACATGGCAG
1 GGATGACATGGCAG
64837 TCAACGGATG
Statistics
Matches: 22, Mismatches: 0, Indels: 9
0.71 0.00 0.29
Matches are distributed among these distances:
12 4 0.18
13 8 0.36
16 8 0.36
17 2 0.09
ACGTcount: A:0.26, C:0.14, G:0.42, T:0.19
Consensus pattern (17 bp):
GGATGACATGGCAGCAT
Found at i:64847 original size:19 final size:19
Alignment explanation
Indices: 64823--64893 Score: 88
Period size: 19 Copynumber: 3.6 Consensus size: 19
64813 TGTGGCAGAT
*
64823 GGATGACATGGCAGTCAAC
1 GGATGACGTGGCAGTCAAC
*
64842 GGATGACGTGGCAATCAAC
1 GGATGACGTGGCAGTCAAC
* *
64861 GGATGACTTGGCATGTCAATG
1 GGATGACGTGGCA-GTCAA-C
64882 GGATGACGTGGC
1 GGATGACGTGGC
64894 GAAATCTTAC
Statistics
Matches: 44, Mismatches: 6, Indels: 2
0.85 0.12 0.04
Matches are distributed among these distances:
19 29 0.66
20 4 0.09
21 11 0.25
ACGTcount: A:0.27, C:0.18, G:0.35, T:0.20
Consensus pattern (19 bp):
GGATGACGTGGCAGTCAAC
Found at i:67370 original size:437 final size:436
Alignment explanation
Indices: 66580--67383 Score: 1064
Period size: 438 Copynumber: 1.8 Consensus size: 436
66570 CGCGTTGGCT
* * *
66580 TTTATTTTTGTATTTTTTTTCTATTTATCCGACTAAGGTGATTCAAGTGTCTTTTAAAGGTTATT
1 TTTATTTTTGTATTTTTGTTCTATTTATCCGACTAAGGTGATTCAAGTGTCTTTCAAAGGTAATT
* * * **
66645 TCATGATCTACAATTTCCATTAAGAACTTAAAAGCCAATTTTAATGTTTTGATTCTAAAAAATGC
66 TCATGATCTACAATTTCCATGAAGAACTCAAAAGCAAATTTTAATGTTTCAATTCTAAAAAATGC
* * * * * * * *
66710 TTCCGAAATGTTGTGGTTTTGATTGCCGGTTAATTTAATATCGTATCATTTTTTGTCCACATGTC
131 TGCAGAAATGTTGTCGTTTCGATTGCCGGTTAATTTAATACCATATCAATTTTCGTCCACATGTC
* * * * * * * ** *
66775 CGATTGAAGTTATTGAAGTGTCGATTAAATGGTTATTGCATGATTTACAATTTTCATGAAGGATC
196 CAATTAAAGTTATTCAAGTGACGATTAAAAGGTTATTGCATGATCTACAACTTTCATGAAAAACC
* * * *
66840 CGAAAGTTAAATTTGATTTACGAGTTTCGTAAAGGGTTCAATAGGAAATTTTTATGTTTTAAGAT
261 CGAAAGTTAAATTTGATCTACGAGTTTCATAAAGGGTTCAAAAGGAAATTTTTATGTTTCAAGAT
*
66905 CTCCATTAACAAACATTTTCTTATTTGAATTATTTATCAAATGACCATCATACTTTTCTACTTTA
326 CTCCATTAACAAACATTTTCTTATTTGAATTAGTTATCAAATGACCATCATACTTTTCTACTTTA
66970 TACTACTTAGTACTTTACAAATTCTATCTTAATATAACGTTTAAGC
391 TACTACTTAGTACTTTACAAATTCTATCTTAATATAACGTTTAAGC
* * * * *
67016 TTTA-TTTTGTTATTCTTTGTTCTATTTGTCGGATTAAGTTGATTCATGTGTCTATTCAAAGGTA
1 TTTATTTTTG-TATT-TTTGTTCTATTTATCCGACTAAGGTGATTCAAGTGTCT-TTCAAAGGTA
* *
67080 ATTTCATGATCTACAACTTT-CATGAAGGACTCAAAAGCAAATTTTTATGTTTCAATTC-ATAAA
63 ATTTCATGATCTACAA-TTTCCATGAAGAACTCAAAAGCAAATTTTAATGTTTCAATTCTA-AAA
* **
67143 AATGCTGCATAAAT-TTGGTCGTTTCGATTGTTGGTCT-ATTTAATACCATAT-AATTTTCGATC
126 AATGCTGCAGAAATGTT-GTCGTTTCGATTGCCGGT-TAATTTAATACCATATCAATTTTCG-TC
* *
67205 CACATGTCCAATTAAAGTTATTCAAGTGACGATTAAAAGGTTATTGTATGATCTACGACTTTCAT
188 CACATGTCCAATTAAAGTTATTCAAGTGACGATTAAAAGGTTATTGCATGATCTACAACTTTCAT
* * *
67270 GAAAAACCCGAAAGTT-AATTTGATCTACGAGTTTTATGAAGGGTTCAAAAGGGAATTTTTATGT
253 GAAAAACCCGAAAGTTAAATTTGATCTACGAGTTTCATAAAGGGTTCAAAAGGAAATTTTTATGT
*
67334 TTCAAGATCTCCATTAACAAATATTTTCTTATTTGAATTAGTTATCAAAT
318 TTCAAGATCTCCATTAACAAACATTTTCTTATTTGAATTAGTTATCAAAT
67384 CACCCTATTT
Statistics
Matches: 313, Mismatches: 47, Indels: 15
0.83 0.13 0.04
Matches are distributed among these distances:
435 5 0.02
436 8 0.03
437 130 0.42
438 166 0.53
439 4 0.01
ACGTcount: A:0.31, C:0.13, G:0.14, T:0.42
Consensus pattern (436 bp):
TTTATTTTTGTATTTTTGTTCTATTTATCCGACTAAGGTGATTCAAGTGTCTTTCAAAGGTAATT
TCATGATCTACAATTTCCATGAAGAACTCAAAAGCAAATTTTAATGTTTCAATTCTAAAAAATGC
TGCAGAAATGTTGTCGTTTCGATTGCCGGTTAATTTAATACCATATCAATTTTCGTCCACATGTC
CAATTAAAGTTATTCAAGTGACGATTAAAAGGTTATTGCATGATCTACAACTTTCATGAAAAACC
CGAAAGTTAAATTTGATCTACGAGTTTCATAAAGGGTTCAAAAGGAAATTTTTATGTTTCAAGAT
CTCCATTAACAAACATTTTCTTATTTGAATTAGTTATCAAATGACCATCATACTTTTCTACTTTA
TACTACTTAGTACTTTACAAATTCTATCTTAATATAACGTTTAAGC
Found at i:70940 original size:36 final size:36
Alignment explanation
Indices: 70893--70962 Score: 113
Period size: 36 Copynumber: 1.9 Consensus size: 36
70883 TTTAATAACC
* *
70893 TTACATCTTTTGTGATTTTGGTTATCATATTTCTTA
1 TTACATCTTTTGTAATTTTGATTATCATATTTCTTA
*
70929 TTACATTTTTTGTAATTTTGATTATCATATTTCT
1 TTACATCTTTTGTAATTTTGATTATCATATTTCT
70963 CCAAAATCTC
Statistics
Matches: 31, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
36 31 1.00
ACGTcount: A:0.21, C:0.10, G:0.09, T:0.60
Consensus pattern (36 bp):
TTACATCTTTTGTAATTTTGATTATCATATTTCTTA
Found at i:72080 original size:6 final size:6
Alignment explanation
Indices: 72058--72093 Score: 54
Period size: 6 Copynumber: 5.8 Consensus size: 6
72048 GTTTAGACTT
*
72058 ATATAG TATATAA ATATAG ATATAG ATATAG ATATA
1 ATATAG -ATATAG ATATAG ATATAG ATATAG ATATA
72094 TATGTATGTG
Statistics
Matches: 27, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
6 22 0.81
7 5 0.19
ACGTcount: A:0.53, C:0.00, G:0.11, T:0.36
Consensus pattern (6 bp):
ATATAG
Done.