Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024487.1 Corchorus olitorius cultivar O-4 contig24520, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60880

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
616--706
31
3.0
31
82
3
96
38
21
13
26
1.90
9321--9403
22
3.8
21
73
17
64
57
1
2
38
1.19
9323--9371
25
2.0
25
84
8
64
59
0
0
40
0.98
10822--10859
11
3.5
11
89
10
51
39
0
2
57
1.12
22811--22844
16
2.1
16
100
0
68
23
11
0
64
1.26
25836--25935
52
1.9
52
93
0
173
31
11
7
51
1.64
26636--26660
12
2.1
12
100
0
50
16
8
8
68
1.38
27718--27761
23
2.0
21
82
8
52
11
6
2
79
1.01
35876--35948
23
3.3
23
88
3
105
41
5
16
36
1.72
35979--36039
22
2.8
22
84
0
77
44
9
11
34
1.74
50833--50884
27
2.0
27
88
3
79
30
46
13
9
1.75
56016--56065
26
1.9
26
88
8
75
0
6
16
78
0.95
57954--57997
22
2.0
21
91
4
70
40
2
6
50
1.42
59487--59601
58
2.0
58
84
3
151
32
13
20
33
1.92

Tables:   1

The End!