Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024490.1 Corchorus olitorius cultivar O-4 contig24523, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11032

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1809--1840
6
5.3
6
92
0
55
71
0
0
28
0.86
5456--5769
106
3.0
106
83
6
417
42
9
9
38
1.70
5456--5722
101
2.6
102
86
4
358
41
10
9
37
1.73
8744--8892
17
8.4
17
86
7
190
16
5
20
57
1.58
8743--8891
54
2.8
53
89
5
228
16
5
20
57
1.58
8744--8892
71
2.1
71
92
2
246
16
5
20
57
1.58
9609--9682
36
2.1
36
92
0
121
45
4
17
32
1.67
9697--9737
21
2.0
21
90
9
66
53
12
17
17
1.72

Tables:   1

The End!