Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024491.1 Corchorus olitorius cultivar O-4 contig24524, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11950

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1467--1961
40
11.7
40
74
13
348
17
26
19
35
1.95
1325--1625
87
3.5
87
93
0
523
17
27
19
34
1.95
1319--1749
127
3.4
126
81
10
475
17
26
19
36
1.94
1549--1904
87
4.2
86
82
5
379
18
27
18
35
1.94
1329--1835
214
2.3
213
87
3
710
17
27
19
35
1.95
1319--1835
127
4.0
125
77
15
461
17
26
19
35
1.95
3235--3266
11
2.9
11
95
0
55
0
3
15
81
0.82
4833--4896
30
2.1
30
85
5
85
42
4
17
35
1.70
8888--8941
20
2.7
21
82
8
58
16
11
18
53
1.72
11404--11558
21
7.4
21
96
1
235
28
19
25
26
1.99

Tables:   1

The End!