Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024494.1 Corchorus olitorius cultivar O-4 contig24527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17373

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1229--1276
21
2.3
21
81
0
60
20
22
39
16
1.92
4448--4511
28
2.2
28
83
2
74
40
15
6
37
1.73
5705--5738
10
3.5
10
96
4
61
26
0
38
35
1.57
8620--8670
15
3.3
15
88
2
75
13
5
9
70
1.32
14069--14213
75
1.9
75
98
0
281
39
8
20
31
1.83
14597--14654
27
2.2
25
82
11
73
84
1
13
0
0.70
14610--14644
10
3.5
10
92
7
54
82
0
17
0
0.66
14597--14653
17
3.4
16
77
17
62
84
1
14
0
0.71
15477--15572
21
4.6
21
89
2
140
29
17
27
26
1.98
16483--16574
21
4.4
21
91
2
125
29
17
26
27
1.97

Tables:   1

The End!